Open tseemann opened 4 years ago
You provide a wrapper miniasm_and_minipolish.sh to do both steps.
miniasm_and_minipolish.sh
I was wondering if you could add option, or just run minimap2/miniasm automatically if no assembly is provided (or make it an option/switch) ?
This would remove the need for the bash script (which isn't installed in PATH by pip3 ?)
You provide a wrapper
miniasm_and_minipolish.shto do both steps.I was wondering if you could add option, or just run minimap2/miniasm automatically if no assembly is provided (or make it an option/switch) ?
This would remove the need for the bash script (which isn't installed in PATH by pip3 ?)