rrwick / Porechop

adapter trimmer for Oxford Nanopore reads
GNU General Public License v3.0
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OSError: [Errno 5] Input/output error #85

Open lappazos opened 4 years ago

lappazos commented 4 years ago

i had this issue at the end of my run. what can i do?

Saving trimmed reads to barcode-specific files pigz not found - using gzip to compress Traceback (most recent call last): File "/usr/local/bin/porechop", line 11, in load_entry_point('porechop==0.2.4', 'console_scripts', 'porechop')() File "/usr/local/lib/python3.6/dist-packages/porechop/porechop.py", line 79, in main args.discard_unassigned) File "/usr/local/lib/python3.6/dist-packages/porechop/porechop.py", line 672, in output_reads barcode_files[barcode_name].write(read_str) OSError: [Errno 5] Input/output error