search

rrwick / Trycycler

A tool for generating consensus long-read assemblies for bacterial genomes
GNU General Public License v3.0
306 stars 28 forks source link

Parallelization of get_pairwise_alignments #64

Closed danpal96 closed 1 year ago

danpal96 commented 1 year ago

All pytest tests passed and outputs are identical (except for the order of the calculations of the pairwise alignments in the log) in a test with contigs

Issue #63

rrwick commented 1 year ago

Thanks for this - I've merged it! Just do keep the log consistent and tidy, I've made a few tweaks (d987636) to ensure that the pairwise alignment results are printed in order.