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rrwick / Trycycler

A tool for generating consensus long-read assemblies for bacterial genomes
GNU General Public License v3.0
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unicycler failed --no_correct #76

Closed DingJingZhi closed 4 months ago

DingJingZhi commented 4 months ago

https://github.com/rrwick/Trycycler/wiki/Guide-to-bacterial-genome-assembly#17-unicycler-hybrid-assembly unicycler -1 short_1.fastq.gz -2 short_2.fastq.gz -s short_u.fastq.gz -l long.fastq.gz -o unicycler_assembly --threads 16 --no_correct

unicycler: error: unrecognized arguments: --no_correct https://github.com/rrwick/Unicycler searching, there is no no_correct.

rrwick commented 4 months ago

Thanks for pointing that out. The --no_correct option is no longer in the current version of Unicycler, so I've updated the commands in this guide (and made a few other little changes).

Also, since this guide is now on my blog, I've removed it from the Trycycler wiki so there aren't two separate copies.