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rrwick / Unicycler

hybrid assembly pipeline for bacterial genomes
GNU General Public License v3.0
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Update spades installed with unicycler #314

Open hafizmtalha opened 1 year ago

hafizmtalha commented 1 year ago

How can I update the spades installed with unicycler ? I had spades 3.15 installed but when I installed unicycler with apt-get it rewrote the spades to v3.13. I updated the unicycler to lates version but how can I update that version to 3.15 ?

termithorbor commented 1 year ago

Did you use Conda for installing Unicycler? if so you can run conda update spades or conda install spades=3.15.5

JosieMainwaring commented 8 months ago

Has anyone has any luck with this? I have had the same issue as OP and tried updating in multiple ways, deleting and re-installing, re-installing using binaries vs source code, all no luck

hafizmtalha commented 8 months ago

Did you use Conda for installing Unicycler? if so you can run conda update spades or conda install spades=3.15.5

yes I did.. no luck with that as well