I'm running into the same error as described in issue #203 (https://github.com/rrwick/Unicycler/issues/203) even after updating Unicycler to the most recent version. All dependencies are installed:
Dependencies:
Program Version Status
spades.py 3.14.1 good
racon 1.4.13 good
makeblastdb 2.10.1+ good
tblastn 2.10.1+ good
i'm running into the same error with unicycler 0.5.0:
Traceback (most recent call last):
File ".pyenv/versions/3.8.5/bin/unicycler", line 11, in
load_entry_point('unicycler==0.5.0', 'console_scripts', 'unicycler')()
File ".pyenv/versions/3.8.5/lib/python3.8/site-packages/unicycler/unicycler.py", line 155, in main
graph.clean_up_after_bridging_2(seg_nums_used_in_bridges, args.min_component_size,
File ".pyenv/versions/3.8.5/lib/python3.8/site-packages/unicycler/assembly_graph.py", line 1363, in clean_up_after_bridging_2
usedupness_scores[seg_num] = self.get_usedupness_score(seg_num, unbridged_graph)
File ".pyenv/versions/3.8.5/lib/python3.8/site-packages/unicycler/assembly_graph.py", line 1526, in get_usedupness_score
depth_fraction_used = depth_used / original_depth
ZeroDivisionError: float division by zero
I'm running into the same error as described in issue #203 (https://github.com/rrwick/Unicycler/issues/203) even after updating Unicycler to the most recent version. All dependencies are installed:
Dependencies: Program Version Status spades.py 3.14.1 good
racon 1.4.13 good
makeblastdb 2.10.1+ good
tblastn 2.10.1+ good