Hello All, I was trying to use unicycler for illumina reads assembly on M1 Mac. But spades crashed. Could you please help me to solve this?
"Dependencies:
Program Version Status
spades.py 3.15.2 good
racon not used
makeblastdb 2.15.0+ good
tblastn 2.15.0+ good
bowtie2-build 2.5.2 good
bowtie2 2.5.2 good
samtools 1.18 good
java 21.0.1 good
pilon 1.24 good
bcftools not used
SPAdes read error correction (2023-11-21 20:46:02)
Unicycler uses the SPAdes read error correction module to reduce the number of errors in the short read before SPAdes assembly. This can make the assembly faster and simplify the assembly graph
structure.
Error: SPAdes crashed! Please view spades.log for more information."
Hello All, I was trying to use unicycler for illumina reads assembly on M1 Mac. But spades crashed. Could you please help me to solve this?
"Dependencies: Program Version Status
spades.py 3.15.2 good
racon not used makeblastdb 2.15.0+ good
tblastn 2.15.0+ good
bowtie2-build 2.5.2 good
bowtie2 2.5.2 good
samtools 1.18 good
java 21.0.1 good
pilon 1.24 good
bcftools not used
SPAdes read error correction (2023-11-21 20:46:02) Unicycler uses the SPAdes read error correction module to reduce the number of errors in the short read before SPAdes assembly. This can make the assembly faster and simplify the assembly graph structure.
Error: SPAdes crashed! Please view spades.log for more information."