Add code for the trait-dependent simulations considering two carrying capacities for each trait state.
Improvements to the relaxed rate model fitting procedure.
Add DAISIE_count_species() to count the number of species in a datalist or simulated data.
Simply printing code by wrapping multiple instances into print_parameters_and_loglik().
Overall documentation improvements and updated references.
Bug fix in DAISIE_sim_cr_iw(), which wrongly computed number of species at present. #147
Improve the likelihood calculation. Fixed incorrect likelihood present for type 2 case CS model inference if the values of lambda were high, in the C++ implementation.
Overhaul GHA workflows to be more up to date and more conservative when to run. Feature branches require the tag
[run ci] be added to the commit message to run.
DAISIE 4.3.0
DAISIE_count_species()
to count the number of species in a datalist or simulated data.print_parameters_and_loglik()
.DAISIE_sim_cr_iw()
, which wrongly computed number of species at present. #147