search

rsinghlab / MADDi

This repository is for the Multimodal Alzheimer’s Disease Diagnosis framework (MADDi).
MIT License
82 stars 16 forks source link

Regarding the source of dataset #8

Closed ManojKumar002 closed 1 year ago

ManojKumar002 commented 1 year ago

Hello, In the file preprocess_genetic/concat_vcfs.py we are facing multiple error due to the incompatible dataset.Can you please share the exact link of dataset in ADNI website or its better if you provide the sample vcf file.

michalg04 commented 1 year ago

Hi there, Thank you for reaching out! The supplementary file describes exactly which genetic files were used. On the ADNI website, you can filter based on the criteria mentioned in the supplementary. I cannot share any ADNI sample files, and I am hesitant to share a link since the website has changes since 2021 when I accessed the data. Hope you understand!

ManojKumar002 commented 1 year ago

Hello, Recently we found that the dataset which we were using is 2013 version and the the dataset which you had worked is on 2014 version. Thank you.

sydat2701 commented 11 months ago

Hello, In the file preprocess_genetic/concat_vcfs.py we are facing multiple error due to the incompatible dataset.Can you please share the exact link of dataset in ADNI website or its better if you provide the sample vcf file.

Hi, I'm facing the same problem with you. Did you solve it? If yes, could you share the dataset with me, because I also really want to experience with this work. Thank you so much for your help.