Closed rsokl closed 5 years ago
The following yaml seems to work. I'd like at least one independent verification:
name: plymi
channels:
- conda-forge
- defaults
dependencies:
- alabaster=0.7.12=py_0
- asn1crypto=0.24.0=py37_1003
- attrs=19.1.0=py37_1
- backcall=0.1.0=py37_0
- blas=1.0=mkl
- bleach=3.1.0=py37_0
- ca-certificates=2019.1.23=0
- certifi=2019.3.9=py37_0
- cffi=1.12.3=py37hb32ad35_0
- colorama=0.4.1=py37_0
- cryptography=2.6.1=py37hb32ad35_0
- cycler=0.10.0=py37_0
- decorator=4.4.0=py37_1
- defusedxml=0.6.0=py_0
- entrypoints=0.3=py37_0
- freetype=2.9.1=ha9979f8_1
- icc_rt=2019.0.0=h0cc432a_1
- icu=58.2=ha66f8fd_1
- intel-openmp=2019.3=203
- ipykernel=5.1.0=py37h39e3cac_0
- ipython=7.5.0=py37h39e3cac_0
- ipython_genutils=0.2.0=py37_0
- ipywidgets=7.4.2=py37_0
- jedi=0.13.3=py37_0
- jinja2=2.10.1=py37_0
- jpeg=9b=hb83a4c4_2
- jsonschema=3.0.1=py37_0
- jupyter=1.0.0=py37_7
- jupyter_client=5.2.4=py37_0
- jupyter_console=6.0.0=py37_0
- jupyter_core=4.4.0=py37_0
- kiwisolver=1.0.1=py37h6538335_0
- libpng=1.6.37=h2a8f88b_0
- libsodium=1.0.16=h9d3ae62_0
- m2w64-gcc-libgfortran=5.3.0=6
- m2w64-gcc-libs=5.3.0=7
- m2w64-gcc-libs-core=5.3.0=7
- m2w64-gmp=6.1.0=2
- m2w64-libwinpthread-git=5.0.0.4634.697f757=2
- markupsafe=1.1.1=py37he774522_0
- matplotlib=3.0.3=py37hc8f65d3_0
- mistune=0.8.4=py37he774522_0
- mkl=2019.3=203
- mkl_fft=1.0.10=py37h14836fe_0
- mkl_random=1.0.2=py37h343c172_0
- msys2-conda-epoch=20160418=1
- nbconvert=5.4.1=py37_3
- nbformat=4.4.0=py37_0
- nbsphinx=0.4.2=py_0
- notebook=5.7.8=py37_0
- numpy=1.16.3=py37h19fb1c0_0
- numpy-base=1.16.3=py37hc3f5095_0
- openssl=1.1.1b=he774522_1
- packaging=19.0=py_0
- pandoc=2.1.3=0
- pandocfilters=1.4.2=py37_1
- parso=0.4.0=py_0
- pickleshare=0.7.5=py37_0
- pip=19.1=py37_0
- prometheus_client=0.6.0=py37_0
- prompt_toolkit=2.0.9=py37_0
- pycparser=2.19=py37_1
- pygments=2.3.1=py37_0
- pyopenssl=19.0.0=py37_0
- pyparsing=2.4.0=py_0
- pyqt=5.9.2=py37h6538335_2
- pyrsistent=0.14.11=py37he774522_0
- pysocks=1.6.8=py37_1002
- python=3.7.3=h8c8aaf0_1
- python-dateutil=2.8.0=py37_0
- pytz=2019.1=py_0
- pywinpty=0.5.5=py37_1000
- pyzmq=18.0.0=py37ha925a31_0
- qt=5.9.7=vc14h73c81de_0
- qtconsole=4.4.3=py37_0
- requests=2.21.0=py37_1000
- send2trash=1.5.0=py37_0
- setuptools=41.0.0=py37_0
- sip=4.19.8=py37h6538335_0
- six=1.12.0=py37_0
- sphinxcontrib-applehelp=1.0.1=py_0
- sphinxcontrib-devhelp=1.0.1=py_0
- sphinxcontrib-htmlhelp=1.0.2=py_0
- sphinxcontrib-jsmath=1.0.1=py_0
- sphinxcontrib-qthelp=1.0.2=py_0
- sphinxcontrib-serializinghtml=1.1.1=py_0
- sqlite=3.28.0=he774522_0
- terminado=0.8.2=py37_0
- testpath=0.4.2=py37_0
- tornado=6.0.2=py37he774522_0
- traitlets=4.3.2=py37_0
- vc=14.1=h0510ff6_4
- vs2015_runtime=14.15.26706=h3a45250_0
- wcwidth=0.1.7=py37_0
- webencodings=0.5.1=py37_1
- wheel=0.33.1=py37_0
- widgetsnbextension=3.4.2=py37_0
- win_inet_pton=1.1.0=py37_0
- wincertstore=0.2=py37_0
- winpty=0.4.3=4
- zeromq=4.3.1=h33f27b4_3
- zlib=1.2.11=h62dcd97_3
- pip:
- babel==2.6.0
- chardet==3.0.4
- docutils==0.14
- idna==2.8
- imagesize==1.1.0
- jupytext==1.1.1
- mock==2.0.0
- numpydoc==0.9.1
- pbr==5.2.0
- pyyaml==5.1
- snowballstemmer==1.2.1
- sphinx==1.8.4
- sphinx-rtd-theme==0.4.3
- sphinxcontrib-websupport==1.1.0
- testfixtures==6.7.0
- urllib3==1.24.2
Create the conda env with:
conda env create -f environment.yml
For some reason I had to pip-install sphinx-rtd-theme
manually afterwards..
Getting an error here...
$ conda env create -f environment.yml
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/anaconda3/lib/python3.7/site-packages/conda/exceptions.py", line 1043, in __call__
return func(*args, **kwargs)
File "/anaconda3/lib/python3.7/site-packages/conda_env/cli/main.py", line 73, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/anaconda3/lib/python3.7/site-packages/conda_env/cli/main_create.py", line 77, in execute
directory=os.getcwd())
File "/anaconda3/lib/python3.7/site-packages/conda_env/specs/__init__.py", line 40, in detect
if spec.can_handle():
File "/anaconda3/lib/python3.7/site-packages/conda_env/specs/yaml_file.py", line 18, in can_handle
self._environment = env.from_file(self.filename)
File "/anaconda3/lib/python3.7/site-packages/conda_env/env.py", line 144, in from_file
return from_yaml(yamlstr, filename=filename)
File "/anaconda3/lib/python3.7/site-packages/conda_env/env.py", line 130, in from_yaml
data = validate_keys(data, kwargs)
File "/anaconda3/lib/python3.7/site-packages/conda_env/env.py", line 35, in validate_keys
for key in data.keys():
AttributeError: 'NoneType' object has no attribute 'keys'
This seems like a conda bug. Have you updated conda recently?
Just updated and it works! Consider closing?
By the way, we should probably verify that builds work too--I don't know what command to run atm. it'd be great if you could also include this information on readme.md.
I got it to work by running ./Python/make.bat html
, but then the build_to_doc.py
fails because assert (root/"Python"/"_build"/".nojekyll").is_file()
fails (my _build
doesn't generate that file.
Right now, I have to manually install jupytext
and sphinx-rtd-theme
after the conda env setup. Let me know if I'm doing this right.
Just a separate note, I cannot use this on a different platform (like my Mac). Upon doing some research, this is expected conda behavior as the same packages and versions are rarely available across platforms. To make it platform-agnostic, consider conda-devenv or maybe just a regular pip requirements.txt file?
Current versions that successfully build plymi