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rspatial / terra

R package for spatial data handling https://rspatial.github.io/terra/reference/terra-package.html
GNU General Public License v3.0
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potential problem between terra and raster pkg - classes Raster and SpatRaster #443

Closed sjevelazco closed 2 years ago

sjevelazco commented 2 years ago

Hi I am developing a package and using raster and terra as dependencies. Yesterday, after updating my R, terra, and raster packages, I had an error that does not allow me to install my package correctly. This error seems to be related to the last version of raster and terra package. See the error message below

*devtools::install_github("sjevelazco/flexsdm") E> Error: package slot missing from signature for generic 'coerce' E> and classes Raster, SpatRaster E> cannot use with duplicate class names (the package may need to be re-installed) E> Execution halted E> ERROR: lazy loading failed for package 'flexsdm' E> removing 'C:/Users/santi/AppData/Local/Temp/RtmpGKCIF0/Rinst6281b104f0c/flexsdm' E> ----------------------------------- E> ERROR: package installation failed**

Also, started to appear an error in the test workflow, which I presume must be associated with the installation error above.

Run covr::codecov() Error: Error in file(con, "r") : cannot open the connection Calls: -> package_coverage -> add_hooks -> readLines -> file In addition: Warning messages: 1: In utils::install.packages(repos = NULL, lib = tmp_lib, pkg$path, : installation of package 'D:/a/flexsdm/flexsdm' had non-zero exit status 2: In file(con, "r") : cannot open file 'C:/Users/runneradmin/AppData/Local/Temp/RtmpIJSb1N/R_LIBS19b42a3730ff/flexsdm/R/flexsdm': No such file or directory Execution halted Error: Process completed with exit code 1.

I would appreciate any help. My package is under review for publication.

Thank you in advance

rhijmans commented 2 years ago

This happens because of changes between raster and terra (terra used to depend on raster, now it is the other way around). This problem should go away when terra gets updated on CRAN (in January). Can you test your package with the development version of terra instead?

sjevelazco commented 2 years ago

I installed the development version, and it works. Thanks

sjevelazco commented 2 years ago

Hello Robert

Please, could you tell me on which date the new version of terra will be available on CRAN?

Thank you.

El mar, 14 dic 2021 a las 10:23, Robert Hijmans @.***>) escribió:

Closed #443 https://github.com/rspatial/terra/issues/443.

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Santiago J. E. Velazco, PhD

Postdoctoral researcher.

Department of Botany and Plant Sciences. University of California - Riverside

https://twitter.com/Santiag43066556 https://www.researchgate.net/profile/Santiago_Velazco3 https://orcid.org/0000-0002-7527-0967

rhijmans commented 2 years ago

I plan to send it to CRAN this weekend or early next week.