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rstudio / packrat

Packrat is a dependency management system for R
http://rstudio.github.io/packrat/
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packrat trying to install packages from CRAN while it's from Github #622

Closed oude-gao closed 3 years ago

oude-gao commented 3 years ago

Hi I am trying to deploy some content depending on an internal package on Github, but packrat tried to install it from CRAN:

[Connect] 2021/02/11 21:13:41.029774085 Installing utlbia (0.0.1.0031) ... [Connect] 2021/02/11 21:13:41.136226299 curl: HTTP 200 https://cran.rstudio.com/src/contrib/PACKAGES.rds [Connect] 2021/02/11 21:13:41.894970372 curl: HTTP 404 https://cran.rstudio.com/src/contrib/Archive/utlbia/utlbia_0.0.1.0031.tar.gz

The DESCRIPTION file looks like this:

Package: utlbia ... License: GPL-3 Encoding: UTF-8 LazyData: true Roxygen: list(markdown = TRUE) RoxygenNote: 7.1.1 Depends: R (>= 2.10) Imports: odbc, shiny, dplyr RemoteType: github RemoteHost: api.github.com RemoteRepo: utlbia RemoteUsername: vnsny-bia RemoteRef: dev_datasci RemoteSha: 0a4eaf5764b0028e8775565886e9f3b0af7c8858 GithubRepo: utlbia GithubUsername: vnsny-bia GithubRef: dev_datasci GithubSHA1: 0a4eaf5764b0028e8775565886e9f3b0af7c8858 NeedsCompilation: no Packaged: 2021-02-11 20:34:00 UTC; root Built: R 4.0.3; ; 2021-02-11 20:34:01 UTC; unix

The most recent packrat is installed: [Connect] 2021/02/11 21:13:40.091572456 Managed packrat version: 0.5.0.26

I would really appreciate it if some solution could be provided. Thanks!

scubastevew commented 3 years ago

Hi Oude,

Can you please submit a support ticket here: https://support.rstudio.com/hc/en-us/requests/new

When submitting the ticket, can you also let us know how the internal package was installed from the publishing IDE?

Can you also can turn on verbose logging in RStudio Server Pro, by going to Tools -> Global Options -> Publishing and selecting "Show diagnostic information when publishing" and sending us the deployment log?

And finally, can we please get a server diagnostic report from your RStudio Connect server by running this command: sudo /opt/rstudio-connect/scripts/run-diagnostics.sh /path/to/output/directory

Attach the server diagnostics report to the support ticket (the output of the script will give you the location of that file).

Thanks, Steve

oude-gao commented 3 years ago

Thanks! Already did!