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rstudio / rsconnect

Publish Shiny Applications, RMarkdown Documents, Jupyter Notebooks, Plumber APIs, and more
http://rstudio.github.io/rsconnect/
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skip when biobase is not installed #898

Closed aronatkins closed 1 year ago

aronatkins commented 1 year ago

Attempting to address:

  ── Error ('test-bundlePackageRenv.R:35:3'): works with BioC packages ───────────
  Error in `renv_snapshot_validate_report(valid, prompt, force)`: aborting snapshot due to pre-flight validation failure
  Backtrace:
       ▆
    1. ├─testthat::expect_no_condition(...) at test-bundlePackageRenv.R:35:2
    2. │ └─testthat:::expect_no_(...)
    3. │   └─testthat:::quasi_capture(enquo(object), NULL, capture)
    4. │     ├─testthat (local) .capture(...)
    5. │     │ └─rlang::try_fetch(...)
    6. │     │   └─base::withCallingHandlers(...)
    7. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    8. └─rsconnect:::snapshotRenvDependencies(app)
    9.   └─renv::snapshot(bundleDir, prompt = FALSE)
   10.     └─renv:::renv_snapshot_validate_report(valid, prompt, force)