rstudio / rsconnect

Publish Shiny Applications, RMarkdown Documents, Jupyter Notebooks, Plumber APIs, and more
http://rstudio.github.io/rsconnect/
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resurrect skipped bioc renv test #913

Open aronatkins opened 1 year ago

aronatkins commented 1 year ago

https://github.com/rstudio/rsconnect/pull/912 started skipping an renv+bioc test in CI; can we resurrect it?

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-bundlePackageRenv.R:36:3'): works with BioC packages ───────────
Error in `renv_snapshot_validate_report(valid, prompt, force)`: aborting snapshot due to pre-flight validation failure
Backtrace:
     ▆
  1. ├─testthat::expect_no_condition(...) at test-bundlePackageRenv.R:36:2
  2. │ └─testthat:::expect_no_(...)
  3. │   └─testthat:::quasi_capture(enquo(object), NULL, capture)
  4. │     ├─testthat (local) .capture(...)
  5. │     │ └─rlang::try_fetch(...)
  6. │     │   └─base::withCallingHandlers(...)
  7. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
  8. └─rsconnect:::snapshotRenvDependencies(app)
  9.   └─renv::snapshot(bundleDir, prompt = FALSE) at rsconnect/R/bundlePackageRenv.R:12:2
 10.     └─renv:::renv_snapshot_validate_report(valid, prompt, force)

[ FAIL 1 | WARN 0 | SKIP 6 | PASS 765 ]