wtzmo中的参数 - Githubissues

ruanjue / smartdenovo

Ultra-fast de novo assembler using long noisy reads

GNU General Public License v3.0

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Closed AmicPair closed 5 years ago

AmicPair commented 5 years ago

hello，ruanjue！ wtzmo中的参数 -k：为什么设置5-32的范围，大于32或者放开限制会怎样？

ruanjue commented 5 years ago

-k 32 is large enough, and should never be used in practice. Also, -k 32 is limited by data structure uint64_t.

BTW, I think minimap2 should work better than wtzmo, you can have a try if have interests.

Jue