I experienced the same problem as https://github.com/ruanjue/wtdbg2/issues/7#issuecomment-392053647. I tried using wtdbg --load-alignments reads.kbmap.all and wtdbg --load-alignments reads.kbmap.node1 --load-alignments reads.kbmap.node2 --load-alignments reads.kbmap.node1 ... but neither worked. I wonder if there is anything wrong with my splitter.
As mentioned in issue 7, there's fasta/fastq splitter tools called split_seqs_2.pl. So could you provide the script for me please?
ruanjue
commented
5 years ago
Hi,
I experienced the same problem as https://github.com/ruanjue/wtdbg2/issues/7#issuecomment-392053647. I tried using
wtdbg --load-alignments reads.kbmap.allandwtdbg --load-alignments reads.kbmap.node1 --load-alignments reads.kbmap.node2 --load-alignments reads.kbmap.node1 ...but neither worked. I wonder if there is anything wrong with my splitter. As mentioned in issue 7, there's fasta/fastq splitter tools called split_seqs_2.pl. So could you provide the script for me please?Extremely appreciate of the help.