Closed jccolon84 closed 2 years ago
Hi,
Im trying to run the wtpoa-cns analysis but in the package I downloaded i did not find it:
[jcolon3@boqueron wtdbg2]$ ls apio-wtdbg2.1.dot.gz apio-wtdbg2.ctg.lay.gz chararray.h kbm.c mem_share.h scripts wtdbg2run.sh apio-wtdbg2.1.nodes apio-wtdbg2.events dagcns.h kbm.h pgzf sort.h wtdbg.c apio-wtdbg2.1.reads apio-wtdbg2.frg.dot.gz dbgcns.h kbmpoa.h pgzf.c thread.h wtdbg-cns apio-wtdbg2.2.dot.gz apio-wtdbg2.frg.nodes dna.h ksw.c pgzf.h tripoa.h wtdbg-cns.c apio-wtdbg2.3.dot.gz apio-wtdbg2.kmerdep filereader.h ksw.h PLAtfscDAPIO_LEAF.subreads.fastq.gz txtplot.h wtdbg-graph.h apio-wtdbg2.alignments.gz best_sam_hits4longreads.c filewriter.h kswx.h poacns.h wtdbg2 wtdbg.h apio-wtdbg2.binkmer bit2vec.h general_graph.h LICENSE.txt queue.h wtdbg2.err wtpoa-cns.c apio-wtdbg2.clps bitsvec.h hashset.h list.h README.md wtdbg2.out wtpoa-cnsrun.sh apio-wtdbg2.ctg.dot.gz bitvec.h kbm2 Makefile README-ori.md wtdbg2.pl wtpoa.h
I did not have problem running wtdbg2 and I've already have the data but I cant activate the wtpoa-cns.
Hi,
Im trying to run the wtpoa-cns analysis but in the package I downloaded i did not find it:
[jcolon3@boqueron wtdbg2]$ ls apio-wtdbg2.1.dot.gz apio-wtdbg2.ctg.lay.gz chararray.h kbm.c mem_share.h scripts wtdbg2run.sh apio-wtdbg2.1.nodes apio-wtdbg2.events dagcns.h kbm.h pgzf sort.h wtdbg.c apio-wtdbg2.1.reads apio-wtdbg2.frg.dot.gz dbgcns.h kbmpoa.h pgzf.c thread.h wtdbg-cns apio-wtdbg2.2.dot.gz apio-wtdbg2.frg.nodes dna.h ksw.c pgzf.h tripoa.h wtdbg-cns.c apio-wtdbg2.3.dot.gz apio-wtdbg2.kmerdep filereader.h ksw.h PLAtfscDAPIO_LEAF.subreads.fastq.gz txtplot.h wtdbg-graph.h apio-wtdbg2.alignments.gz best_sam_hits4longreads.c filewriter.h kswx.h poacns.h wtdbg2 wtdbg.h apio-wtdbg2.binkmer bit2vec.h general_graph.h LICENSE.txt queue.h wtdbg2.err wtpoa-cns.c apio-wtdbg2.clps bitsvec.h hashset.h list.h README.md wtdbg2.out wtpoa-cnsrun.sh apio-wtdbg2.ctg.dot.gz bitvec.h kbm2 Makefile README-ori.md wtdbg2.pl wtpoa.h
I did not have problem running wtdbg2 and I've already have the data but I cant activate the wtpoa-cns.