ruanjue / wtdbg2

Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
GNU General Public License v3.0
508 stars 93 forks source link

no kmer peak value during runing wtdbg2,how to change the parameter of -k, -p, and -K #63

Closed feiyu007 closed 5 years ago

feiyu007 commented 5 years ago

** 1 - 201 ** Quatiles: 10% 20% 30% 40% 50% 60% 70% 80% 90% 95% 2 3 6 12 21 34 66 166 550 1569

If the kmer distribution is not good, please kill me and adjust -k, -p, and -K

ruanjue commented 5 years ago

If you are using '-x rs', the distribution is ok.