failing knitr examples

[rundel]

Below are the current knitr example Rmd files that are failing to parse:

• Parsing 001-minimal.Rmd threw an error. Message: Incomplete parsing. Parsed 44 of 63 lines.

  • [x] L44 - Indented code chunk

  • [x] L54 - Quoted code chunk

• Parsing 010-upload.Rmd threw an error. Message: Incomplete parsing. Parsed 6 of 33 lines.

  • [x] Seems like a bad chunk here, 4 trailing backticks - fixed upstream

• Parsing 029-engine-Rcpp.Rmd threw an error. Message: Incomplete parsing. Parsed 11 of 98 lines.

  • [x] engine and name are separated by a comma

• Parsing 046-read-rforge.Rmd threw an error. Message: Incomplete parsing. Parsed 3 of 32 lines.

  • [x] setup chunk doesn't have closing backticks

• Parsing 056-huge-plot.Rmd threw an error. Message: Incomplete parsing. Parsed 4 of 24 lines.

  • [x] gen-data chunk doesn't have closing backticks

• Parsing 058-engine-tikz.Rmd threw an error. Message: Incomplete parsing. Parsed 14 of 35 lines.

  • [x] engine and name are separated by a comma

• Parsing 065-rmd-chunk.Rmd threw an error. Message: Incomplete parsing. Parsed 11 of 31 lines.

  • [x] embedded verbatim chunk fails to parse

• Parsing 084-pandoc.Rmd threw an error. Message: Incomplete parsing. Parsed 87 of 105 lines.

  • [x] issue with table (most likely indented text, i.e. starts with spaces)

• Parsing 099-include-graphics.Rmd threw an error. Message: Incomplete parsing. Parsed 17 of 70 lines.

  • [x] Not sure why this is failing - seems like a reasonable chunk, maybe an issue with commas after the engine and before an option?

    ```{r, include=FALSE}
    # A hack that you should not look at!
    knitr::opts_knit$set(rmarkdown.pandoc.to = 'html')

• Parsing 106-polyglot.Rmd threw an error. Message: Incomplete parsing. Parsed 29 of 75 lines.

  • [x] Same as preceding

• Parsing 115-engine-sql.Rmd threw an error. Message: Incomplete parsing. Parsed 9 of 38 lines.

  • [x] Same as preceding

[rundel]

• Parsing 099-include-graphics.Rmd threw an error. Message: Incomplete parsing. Parsed 44 of 70 lines.
  • [x] engine and name are separated by a comma

[rundel]

Asked about in yihui/knitr-examples#69

[rundel]

See knitr-example issue linked above:

• engine and name separated by a comma is valid syntax
• code chunk being closed by a new chunk starting is valid syntax

[rundel]

Everything is passing now, as of c5ff642 - need to add tests to see if we're parsing correctly