When running run level 2, after STAR mapping has completed, I receive a segmentation fault. It appears as though this is caused by the program calling files which are empty - specifically K562_ATCC.lbias, K562_ATCC.pos.gff, and K562_ATCC.chrmap. I have included an image of the error. I cannot seem to find which step these files are created in.
When running run level 2, after STAR mapping has completed, I receive a segmentation fault. It appears as though this is caused by the program calling files which are empty - specifically K562_ATCC.lbias, K562_ATCC.pos.gff, and K562_ATCC.chrmap. I have included an image of the error. I cannot seem to find which step these files are created in.![screen shot 2015-06-23 at 4 41 23 pm](https://cloud.githubusercontent.com/assets/13022501/8319733/06c2f5ba-19c7-11e5-9b99-b6043d0848b0.png)