feat: Warn instead of panic for missing HGVSg values in vcf-report

rust-bio / rust-bio-tools

A set of command line utilities based on Rust-Bio.

MIT License

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feat: Warn instead of panic for missing HGVSg values in vcf-report #220

Closed fxwiegand closed 2 years ago

fxwiegand commented 2 years ago

This PR changes the behavior of the vcf-report for variants without HGVSg. Now the report will skip the variant and the user will receive a warning with the variant id and position. Beforehand the vcf-report would throw an error if such a variant occurred in the input.