rvalieris / LCS

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question on input data #9

Open suskraem opened 2 years ago

suskraem commented 2 years ago

Hello, I'm wondering if the input files sample1.fastq.gz etc. are containing both the R1 and R2 reads. Thanks, Susanne

rvalieris commented 2 years ago

hello, if your data is paired-end, see https://github.com/rvalieris/LCS/issues/8#issuecomment-1032631553 for an example of how the files should be organized.