rvalieris / parallel-fastq-dump

parallel fastq-dump wrapper
MIT License
265 stars 33 forks source link

SRA Lite #53

Open moqri opened 11 months ago

moqri commented 11 months ago

Does this work with SRA Lite? https://ncbiinsights.ncbi.nlm.nih.gov/2021/10/19/sra-lite/

rvalieris commented 11 months ago

Hello,

I have not tried it myself, but parallel-fastq-dump is just calling fastq-dump under the hood, as long you are using a recent version of SRA toolkit and fastq-dump supports it, it should work.