Spoa v4.0.0 doesn't work when input is FASTA

rvaser / spoa

SIMD partial order alignment tool/library

MIT License

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Spoa v4.0.0 doesn't work when input is FASTA #49

Closed wwliao closed 4 years ago

wwliao commented 4 years ago

Hi Robert,

Recently I upgraded Spoa from v3.0.1 to v4.0.0 and everything works great when the input file in FASTQ format. However, when feeding a FASTA file, it shows:

$ spoa -r 2 test.fa
[spoa::Graph::AddAlignment] error: sequence and weights are of unequal size!

Thanks, Wen-Wei

rvaser commented 4 years ago

Hi Wen-Wei, it should be fixed now, thanks for pointing it out!

Best regards, Robert

wwliao commented 4 years ago

It works now. Thanks a lot!