Closed gevro closed 4 months ago
You have to use these functions the way they are documented. In this case,
cross.adjust
is immaterial.tukey
, it gets changed to something that is allowed, namely sidak
. This is documented in the FAQs
vignette and elsewhere.
Is it possible to specify the adjust method in contrast(combine=TRUE) for the combination across the emmeans list? The documentation says that rbind is used to execute combine = TRUE, but the adjust parameter of contrast appears to be ignored and even though I set it to "tukey" the result says it used "sidak". The cross.adjust parameter doesn't work either.
Strangely, when I set adjust = "mvt", the final result says that "mvt" was used. But I would like to use "tukey" both for the standard p-value adjustment, and for the combine=TRUE combination step.
Thanks