From an email to the mailing list, seems the error is in the reference panel subsetting
Hi ：
when I use STITCH with reference panel, an error occurred：
Error in eigen(h2, symmetric = TRUE) :
error code 1 from Lapack routine 'dsyevr'
and my command line：
Rscript STITCH.R --outputdir=./ --method="diploid" --chr=22 --posfile=s5_22.allele --K=5 --nGen=2600 --nCores=6 --bamlist=bam06x.list --reference_populations='c("CHB","CHS","CHD")' --reference_haplotype_file=1000GP_Phase3_chr22.hap.gz --reference_legend_file=1000GP_Phase3_chr22.legend.gz --reference_sample_file=1000GP_Phase3.sample --S=10
I don't know how to fix it
Thankes ！
Sincerely ，
Lee
From an email to the mailing list, seems the error is in the reference panel subsetting
Hi ： when I use STITCH with reference panel, an error occurred： Error in eigen(h2, symmetric = TRUE) : error code 1 from Lapack routine 'dsyevr' and my command line： Rscript STITCH.R --outputdir=./ --method="diploid" --chr=22 --posfile=s5_22.allele --K=5 --nGen=2600 --nCores=6 --bamlist=bam06x.list --reference_populations='c("CHB","CHS","CHD")' --reference_haplotype_file=1000GP_Phase3_chr22.hap.gz --reference_legend_file=1000GP_Phase3_chr22.legend.gz --reference_sample_file=1000GP_Phase3.sample --S=10 I don't know how to fix it Thankes ！ Sincerely ， Lee