search

rxn4chemistry / biocatalysis-model

RXN for biochemical reactions
MIT License
61 stars 14 forks source link

how to obtain raw data from various databases, especially from Pathbank #6

Closed Yoko1030 closed 1 year ago

Yoko1030 commented 1 year ago

Hello, nice job. I want to know how to obtain raw data from databases （especially from Pathbank）. Thank you !!

drugilsberg commented 1 year ago

Hey @Yoko1030 thanks for the interest in our work, all the databases have their own way to grant access to the raw data. For example PathBank offers various formats (https://pathbank.org/downloads). I recommend checking the links we report here and chose the option that is more suited for your use case/tooling.