Add sharding mode for STIX. This update includes three additional parameters for STIX.
-B Sharding file
-Q Batch queries in table format(left \t right \t len \t SVtype \t ID)
-T Threshold to define STIX_ONE(How many supporting reads define a hit) (default:1)
-B accepts a two-column tsv file, where the first column contains the path of giggle index and the second column contains the path of corresponding index for each row.
-Q accepts a batch queries file in table format (left \t right \t len \t SVtype \t ID). This option is primarily designed for querying multiple SVs that cannot be reformatted into a VCF file.
-T allows users to specify the minimal SV depth (minimal supporting reads) with a default value of 1, consistent with the previous STIX version.
Add sharding mode for STIX. This update includes three additional parameters for STIX.
-B accepts a two-column tsv file, where the first column contains the path of giggle index and the second column contains the path of corresponding index for each row. -Q accepts a batch queries file in table format (left \t right \t len \t SVtype \t ID). This option is primarily designed for querying multiple SVs that cannot be reformatted into a VCF file. -T allows users to specify the minimal SV depth (minimal supporting reads) with a default value of 1, consistent with the previous STIX version.