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rzshrote / pybrops

Python Breeding Optimizer and Simulator: A Python library for simulating and optimizing breeding pipelines.
https://rzshrote.github.io/pybrops/
MIT License
2 stars 1 forks source link

Use NetworKit to keep track of pedigrees #44

Open rzshrote opened 2 years ago

rzshrote commented 2 years ago

Can use a directed acyclic graph to keep track of parents, progeny and extract families. Can also use a graph data structure to calculate inbreeding coefficients from pedigrees.

rzshrote commented 2 years ago

A faster alternative might be NetworKit.