s-andrews / compter

An application to graphically summarise kmer enrichment in a set of sequences
GNU General Public License v3.0
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Merge "subset heatmap data file" code into s-andrews master branch #5

Closed StevenWingett closed 4 years ago

StevenWingett commented 4 years ago

Merge "subset heatmap data file" code into s-andrews master branch from StevenWingett/compter master branch.

This new code subsets the data matrix file used in the heatmap generation. Now heatmaps can be made for very large datasets (while the complete results are written to the heatmap matrix text file).

Note that each individual sample is subset separately, since different samples may contain a different number of lines in the matrix file. For example, Sample A may need to be subset 2-fold, while Sample B may need to be subset 10-fold.