s-andrews / nextflow_pipelines

The set of NGS processing pipelines used at Babraham
GNU General Public License v3.0
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Clean up work folder unless something fails #19

Open s-andrews opened 3 years ago

s-andrews commented 3 years ago

The current configuration leaves the work folder in place after the processing has finished. There must be an option we can set to clean this up after we're done (we already have the option to use hardlinks to export the results to the correct folder so we're not using symlinks into work so there's no harm in getting rid of it).