Datasets of type label-multiset should be open-able by imagej, it should convert to an integer type.
(Found by @jonesa3)
Metadata are parsed and the UI let's you select a label-multiset typed dataset, but whey opening, throws
this error trace
```
Exception in thread "AWT-EventQueue-1" java.lang.UnsupportedOperationException
at net.imglib2.type.label.LabelMultisetType.getNativeTypeFactory(LabelMultisetType.java:170)
at net.imglib2.img.imageplus.ImagePlusImgFactory.create(ImagePlusImgFactory.java:69)
at net.imglib2.img.imageplus.ImagePlusImgFactory.create(ImagePlusImgFactory.java:76)
at org.janelia.saalfeldlab.n5.ij.N5Importer.read(N5Importer.java:489)
at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:624)
at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:596)
at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:651)
at org.janelia.saalfeldlab.n5.ij.N5Importer$1.run(N5Importer.java:688)
at org.janelia.saalfeldlab.n5.ij.N5Importer.processThread(N5Importer.java:691)
at org.janelia.saalfeldlab.n5.ij.N5Importer.datasetSelectorCallBack(N5Importer.java:372)
at org.janelia.saalfeldlab.n5.ui.DatasetSelectorDialog.ok(DatasetSelectorDialog.java:756)
at org.janelia.saalfeldlab.n5.ui.DatasetSelectorDialog.lambda$6(DatasetSelectorDialog.java:320)
at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022)
at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348)
at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402)
at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259)
at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:262)
at java.awt.Component.processMouseEvent(Component.java:6539)
at javax.swing.JComponent.processMouseEvent(JComponent.java:3324)
at java.awt.Component.processEvent(Component.java:6304)
at java.awt.Container.processEvent(Container.java:2239)
at java.awt.Component.dispatchEventImpl(Component.java:4889)
at java.awt.Container.dispatchEventImpl(Container.java:2297)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904)
at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535)
at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476)
at java.awt.Container.dispatchEventImpl(Container.java:2283)
at java.awt.Window.dispatchEventImpl(Window.java:2746)
at java.awt.Component.dispatchEvent(Component.java:4711)
at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760)
at java.awt.EventQueue.access$500(EventQueue.java:97)
at java.awt.EventQueue$3.run(EventQueue.java:709)
at java.awt.EventQueue$3.run(EventQueue.java:703)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84)
at java.awt.EventQueue$4.run(EventQueue.java:733)
at java.awt.EventQueue$4.run(EventQueue.java:731)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74)
at java.awt.EventQueue.dispatchEvent(EventQueue.java:730)
at org.GNOME.Accessibility.AtkWrapper$6.dispatchEvent(AtkWrapper.java:717)
at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205)
at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101)
at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
at java.awt.EventDispatchThread.run(EventDispatchThread.java:82)
```
bogovicj
commented
1 year ago
Datasets of type label-multiset should be open-able by imagej, it should convert to an integer type.
(Found by @jonesa3)
Metadata are parsed and the UI let's you select a label-multiset typed dataset, but whey opening, throws
this error trace
``` Exception in thread "AWT-EventQueue-1" java.lang.UnsupportedOperationException at net.imglib2.type.label.LabelMultisetType.getNativeTypeFactory(LabelMultisetType.java:170) at net.imglib2.img.imageplus.ImagePlusImgFactory.create(ImagePlusImgFactory.java:69) at net.imglib2.img.imageplus.ImagePlusImgFactory.create(ImagePlusImgFactory.java:76) at org.janelia.saalfeldlab.n5.ij.N5Importer.read(N5Importer.java:489) at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:624) at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:596) at org.janelia.saalfeldlab.n5.ij.N5Importer.process(N5Importer.java:651) at org.janelia.saalfeldlab.n5.ij.N5Importer$1.run(N5Importer.java:688) at org.janelia.saalfeldlab.n5.ij.N5Importer.processThread(N5Importer.java:691) at org.janelia.saalfeldlab.n5.ij.N5Importer.datasetSelectorCallBack(N5Importer.java:372) at org.janelia.saalfeldlab.n5.ui.DatasetSelectorDialog.ok(DatasetSelectorDialog.java:756) at org.janelia.saalfeldlab.n5.ui.DatasetSelectorDialog.lambda$6(DatasetSelectorDialog.java:320) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:2022) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2348) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:402) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:259) at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:262) at java.awt.Component.processMouseEvent(Component.java:6539) at javax.swing.JComponent.processMouseEvent(JComponent.java:3324) at java.awt.Component.processEvent(Component.java:6304) at java.awt.Container.processEvent(Container.java:2239) at java.awt.Component.dispatchEventImpl(Component.java:4889) at java.awt.Container.dispatchEventImpl(Container.java:2297) at java.awt.Component.dispatchEvent(Component.java:4711) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4904) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4535) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4476) at java.awt.Container.dispatchEventImpl(Container.java:2283) at java.awt.Window.dispatchEventImpl(Window.java:2746) at java.awt.Component.dispatchEvent(Component.java:4711) at java.awt.EventQueue.dispatchEventImpl(EventQueue.java:760) at java.awt.EventQueue.access$500(EventQueue.java:97) at java.awt.EventQueue$3.run(EventQueue.java:709) at java.awt.EventQueue$3.run(EventQueue.java:703) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:84) at java.awt.EventQueue$4.run(EventQueue.java:733) at java.awt.EventQueue$4.run(EventQueue.java:731) at java.security.AccessController.doPrivileged(Native Method) at java.security.ProtectionDomain$JavaSecurityAccessImpl.doIntersectionPrivilege(ProtectionDomain.java:74) at java.awt.EventQueue.dispatchEvent(EventQueue.java:730) at org.GNOME.Accessibility.AtkWrapper$6.dispatchEvent(AtkWrapper.java:717) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:205) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:116) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:105) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:101) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93) at java.awt.EventDispatchThread.run(EventDispatchThread.java:82) ```