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sacdallago / bio_embeddings

Get protein embeddings from protein sequences
http://docs.bioembeddings.com
MIT License
460 stars 65 forks source link

Protocol prottrans_t5_bfd: HTTPError: HTTP Error 406: Not Acceptable #244

Open jiaming28 opened 4 months ago

jiaming28 commented 4 months ago

Metadata

key value
version 0.1.6
cuda True

Parameter

key value
type embed
protocol prottrans_t5_bfd
half_precision_model True
half_precision True

Traceback


Traceback (most recent call last):
  File "/app/bio_embeddings/utilities/pipeline.py", line 262, in execute_pipeline_from_config
    stage_output_parameters = stage_runnable(**stage_parameters)
  File "/app/bio_embeddings/embed/pipeline.py", line 340, in run
    result_kwargs[directory] = get_model_directories_from_zip(
  File "/app/bio_embeddings/utilities/remote_file_retriever.py", line 74, in get_model_directories_from_zip
    request.urlretrieve(url, filename=file_name, reporthook=t.update_to)
  File "/usr/lib/python3.8/urllib/request.py", line 247, in urlretrieve