saeyslab / FlowSOM

Using self-organizing maps for visualization and interpretation of cytometry data
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Can we install FlowSOM from binary using BiocManager on Debian bullseye? #16

Open alex-l-kong opened 2 years ago

alex-l-kong commented 2 years ago

We're trying to install FlowSOM on a Debian bullseye setup as part of a Docker build. FlowSOM takes a very long time to build (around 30-40 minutes) because it needs to install all the dependencies, and there are sometimes dependency issues (especially with cytolib).

Is there a way we can download FlowSOM using a binary package as opposed to from source? If not, is there a way to speed up the installation?