Closed catsargent closed 1 year ago
Hi @catsargent
Can you confirm whether you get this error if you use the default parameters get_DE_info(findMarkers = FALSE)
since the code snippet you showed is only executed when using get_DE_info(findMarkers = TRUE)
?
Note that using get_DE_info(findMarkers = TRUE)
is not recommended, except maybe only if you would have 2/3 samples per group. (this option was added for us for internal testing, not to be used by the end users)
Hi,
when running MNN in step-by-step mode, I get the following error when calling get_DE_info:
It appears to be the last part of the following which is causing the issue:
This is what contrast_tbl looks like (I believe it is set-up fine):
Have you any ideas what the problem might be?
Thanks, Catherine