MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
GNU General Public License v3.0
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Issue with abundance_expression_info, Error in `dplyr::pull()`: Caused by error: ! object 'ligand' not found #45
I ran get_abundance_expression_info() and encountered the debug below, I'm confused whether it's due to the dplyr package itself else.
Thank you for your sincerely answer, I am looking forward to it urgently.
abundance_expression_info = get_abundance_expression_info(sce = sce, sample_id = sample_id, group_id = group_id, celltype_id = celltype_id, min_cells = min_cells, senders_oi = senders_oi, receivers_oi = receivers_oi, lr_network = lr_network, batches = batches)
Error in dplyr::pull():
Caused by error:
! object 'ligand' not found
Run rlang::last_trace() to see where the error occurred.
There were 23 warnings (use warnings() to see them)
rlang::last_trace(drop = FALSE)
<error/rlang_error>
Error in dplyr::pull():
Caused by error:
! object 'ligand' not found
I ran get_abundance_expression_info() and encountered the debug below, I'm confused whether it's due to the dplyr package itself else. Thank you for your sincerely answer, I am looking forward to it urgently.