'combine_sender_receiver_de' function exists in nichenetr and multinichenetr

saeyslab / multinichenetr

MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data

GNU General Public License v3.0

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'combine_sender_receiver_de' function exists in nichenetr and multinichenetr #70

Closed avpatel18 closed 2 months ago

avpatel18 commented 2 months ago

This function takes different arguments so it gives 'unused arguments' error. I think you might want to rename and update tutorials. Thanks!

Chenium123 commented 2 months ago

Same

Chenium123 commented 2 months ago

Same

After retrying, there were no errors. It is likely due to updating the NicheNet version (2.1.4 → 2.1.5). I suggest updating and then trying again.

browaeysrobin commented 2 months ago

If you apply multinichenetr as described in the vignettes, there is no problem with this. Feel free to open an issue in the nichenetr package if there would be issues there.