MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
GNU General Public License v3.0
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Potential namespace conflict with the `summarise` function #73
I noticed a potential namespace conflict with the summarise function. The code snippet below highlights where the conflict occurs: abundance_df_summarized = abundance_df %>% mutate(keep = as.logical(keep)) %>% group_by(group_id, celltype_id) %>% summarise(samples_present = sum(keep))
To improve compatibility and avoid namespace conflicts, I suggest explicitly adding the dplyr namespace in front of summarise
I noticed a potential namespace conflict with the
summarise
function. The code snippet below highlights where the conflict occurs:abundance_df_summarized = abundance_df %>% mutate(keep = as.logical(keep)) %>% group_by(group_id, celltype_id) %>% summarise(samples_present = sum(keep))
To improve compatibility and avoid namespace conflicts, I suggest explicitly adding the
dplyr
namespace in front ofsummarise