Closed lopollar closed 4 months ago
This is only when you use
sp.sh.create_voronoi_boundaries(...)
?
I see what is going on there, we do not write the results to disk.
I will fix this, but due to this https://github.com/saeyslab/napari-sparrow/issues/114, I think a better approach for expanding cells is to use:
sp.im.expand_labels_layer(...)
Yes, I now use it to expand my veins, soI would just for this have to create a labels layer, which seems unnecesary
should be fixed on main by https://github.com/saeyslab/napari-sparrow/pull/188
When exapning cells, and only performing this step, the shapes layer isn't saved properly. When reopening the object, the expanded shapes layer just looks like the original one.
Probably because we just adapt the geometry parameter on disk, but never write it