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saeyslab / nichenetr

NicheNet: predict active ligand-target links between interacting cells
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Error on get_prioritization_tables() #241

Closed qxiong2 closed 6 months ago

qxiong2 commented 6 months ago

Hi Team,

I always got the following error when running get_prioritization_tables(), I am using Seurat v5 and nichenetr 2.0.4

prioritization_tables = get_prioritization_tables(output, prioritizing_weights) Error in auto_copy(): ! x and y must share the same src. x is a <tbl_df/tbl/data.frame> object. y is NULL. Set copy = TRUE if y can be copied to the same source as x (may be slow). Run rlang::last_trace() to see where the error occurred.

Please help me with this, thank you.

qxiong2 commented 6 months ago

I solved it, this is because I don't have spatial data.