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saezlab / MetaProViz

R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
https://saezlab.github.io/MetaProViz/
GNU General Public License v3.0
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MetaProViz::ORA() - Create Helper function for Fishers Exact test. #77

Open ChristinaSchmidt1 opened 10 months ago

ChristinaSchmidt1 commented 10 months ago

Get rid of the dependency to ClusterProfiler to perform the fishers exact test (= Overrepresentation analysis). It is included in two functions: ClusterORA and StandardORA, both located in OverRepresentationAnalysis.R

Potentially make ahelper function to perform fishers exact test based on base R on the "different groups versus background".

In development space!