saezlab / SLAPenrich

Sample Level Analysis of Pathway Alteration Enrichments
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Error when plotting core components #1

Open Setfelix opened 6 years ago

Setfelix commented 6 years ago

Hello,

I hit an error when trying to plot the core components for my enrichment: Error in PATH_COLLECTION$HGNC_SYMBOL[[PFP$pathway_id[i]]] : attempt to select less than one element in get1index This is the command I used: SLAPE.core_components(PATH = "./slap_enrich/", PFP=ov_slap_enrich, EM=likely_somatic_exome_vars, PATH_COLLECTION=KEGG_PATH)

Thanks in advance, Setor

complexgenome commented 2 months ago

@Setfelix @Nic-Nic were you able to resolve this? I run into same error.