Add inhibitory/activatory edges to unknown perturbations in inverse carnival

saezlab / corneto

Unified knowledge-driven network inference from omics data

https://saezlab.github.io/corneto/

GNU General Public License v3.0

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Add inhibitory/activatory edges to unknown perturbations in inverse carnival #5

Open pablormier opened 1 year ago

pablormier commented 1 year ago

If perturbations have a weight of 0, add both edges (activatory/inhibitory) to each perturbation so the optimization process takes one. In the current version (0.9.0-alpha.6) if the weights are 0, only activatory edges are added, biasing the results.