Closed deeenes closed 2 years ago
Hi @deeenes
Which version of decoupleR are you using? I do not use magick nor rsvg (I don't even have them installed in the enviroment where I test decoupleR). GSVA is already included in Suggests.
Sorry, it was my mistake, now I install the dependencies properly: https://status.omnipathdb.org/decoupler/bioc-3.15/2022-04-21/install_deps.out
At least these packages are missing for a successful vignette build: magick, rsvg, GSVA. Should these be in the Suggests section?