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saezlab
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footprints
Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"
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Revert scaling in input experiments?
#25
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mschubert
closed
7 years ago
mschubert
commented
7 years ago
Right now, I scale the resampled scores per experiment.
[x] don't scale in scores, recompute LOOCV model scores
[x] column-scale in heatmap
[x] scale for pathway ROC curves
[x] don't scale for t-SNE plots (?)
Right now, I scale the resampled scores per experiment.