saezlab / liana-py

LIANA+: an all-in-one framework for cell-cell communication
http://liana-py.readthedocs.io/
GNU General Public License v3.0
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Generate Union of Causal Net Predictions #82

Closed dbdimitrov closed 5 months ago

dbdimitrov commented 8 months ago

Some MILP problems result in multiple equally good (local) solutions. A non-arbitrary way (independent of random state) to deal with those is to create a union of them.

SCIPy will additionally not converge properly with larger problems (now more notable due to recent update and size increase of the OmniPath PPI).