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saezlab
/
mistyR
Multiview Intercellular SpaTial modeling framework
https://saezlab.github.io/mistyR/
GNU General Public License v3.0
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Using MISTy on multiple samples
#46
whitneyt1
opened
3 days ago
2
Question about juxta and para view
#45
LynnChan99
opened
2 weeks ago
1
Scaling before running linear model
#44
Zach-Sten
closed
1 day ago
2
Question: IMC and single cell resolution ST data
#43
spatts14
closed
3 months ago
2
Small corrections
#42
leotenshii
closed
5 months ago
0
Included code chunk
#41
leotenshii
closed
5 months ago
0
Added new signature vignette
#40
leotenshii
closed
6 months ago
2
removed progeny dependency
#39
leotenshii
closed
6 months ago
0
Add files via upload
#38
leotenshii
closed
6 months ago
2
Can I merge the results into one?
#37
LynnChan99
closed
7 months ago
3
usage of mistyR for spatial transcriptome cell composition data
#36
archanabhardwaj
closed
7 months ago
1
obtain the spot ID calculated by the juxta view
#35
ckfromCN
closed
8 months ago
1
Issue with MistyR Heatmaps
#34
deconvolute
closed
11 months ago
3
run_misty illegal column names error
#33
mcaponegro
closed
1 year ago
3
cv.folds in run_misty_seurat()
#32
deconvolute
closed
1 year ago
0
Fix readr issue
#31
jtanevski
closed
1 year ago
0
Error in collect_results function
#30
YaobangWang
closed
1 year ago
1
Run misty in subset regions of Visium for cell-colocalization analysis with deconvolution output
#28
lengfei5
closed
1 year ago
2
Update pkgdown site to bootstrap 5
#27
deeenes
closed
1 year ago
0
[BUG] Error in collect_results, performance file not being read correctly
#26
ggruenhagen3
closed
1 year ago
2
Visualization of final model
#25
wangyiqing50
closed
1 year ago
1
merge changes to gha and docker
#24
jtanevski
closed
2 years ago
0
merge changes to gha and docker
#23
jtanevski
closed
2 years ago
0
Provide view-specific models as function
#22
psl-schaefer
closed
2 years ago
0
An irrecoverable exception occurred. R is aborting now ... Segmentation fault (core dumped)
#21
HenrikBengtsson
closed
2 years ago
1
TESTS: Failure (test-misty.R:55:3): run_misty handles evaluation parameters correctly
#20
HenrikBengtsson
closed
2 years ago
3
Devel
#19
nathansteenbuck
closed
2 years ago
0
[Improvements] Please add the following points to the document
#18
DenisSch
closed
1 year ago
1
Devel
#17
psl-schaefer
closed
2 years ago
0
added assertion to check for num unique values
#16
psl-schaefer
closed
2 years ago
0
test extract_signature, clean interaction heatmap
#15
psl-schaefer
closed
2 years ago
0
Devel
#14
psl-schaefer
closed
2 years ago
0
Can I add z axis to the location?Consider three-dimensional coordinates.
#13
xiangrong7
closed
3 years ago
5
Fixed deprecation of `multiprocess`
#12
Nic-Nic
closed
3 years ago
1
Issue installing misty on macOS
#11
nilseling
closed
3 years ago
2
first attempt to get pipeline wrappers
#10
roramirezf
closed
3 years ago
2
separated cache from views.r; improved structure of juxtaview calcula…
#9
ivanovaos
closed
3 years ago
0
Refactoring misty.R
#8
ivanovaos
closed
3 years ago
0
separated cache from views.r; improved structure of juxtaview calcula…
#7
ivanovaos
closed
4 years ago
0
quick fix for filelock unlock
#6
ivanovaos
closed
4 years ago
0
typo comma fix for approximation method in paraview
#5
ivanovaos
closed
4 years ago
0
fixed installation
#4
christianholland
closed
4 years ago
2
Added google analytics
#3
christianholland
closed
4 years ago
5
Initial deployment of gh page
#2
christianholland
closed
4 years ago
0
my valuable contribution to this fantastic tool
#1
gabora
closed
5 years ago
4