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saezlab / transcriptutorial

This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
https://saezlab.github.io/transcriptutorial/
GNU General Public License v3.0
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progenyMembers.RData can not load #35

Closed whiteorchid closed 2 years ago

whiteorchid commented 2 years ago 
load(file = system.file("progenyMembers.RData",package="CARNIVAL"))
Error in readChar(con, 5L, useBytes = TRUE) : cannot open the connection
In addition: Warning message:
In readChar(con, 5L, useBytes = TRUE) :
  cannot open compressed file '', probable reason 'No such file or directory'

May I know if there is a way to fix the above issue, thanks a lot!

gabora commented 2 years ago

Hi, I just added the file to the data folder of this repo. It was in the CARNIVAL package, but was not used by the package, so I removed it last week.
Will update the tutorial tomorrow. Meanwhile you can clone the repo again or just download that file from the data folder.