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sagnikbanerjee15 / Finder

A fully automated gene annotator from RNA-Seq expression data
MIT License
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Use of Long Read (PacBio IsoSeq) #30

Open saxovocal opened 2 years ago

saxovocal commented 2 years ago

May I ask if FINDER is compatible with long read sequencing? If not, how do you recommend enhancing the annotation results with the FINDER output using such data?

Thanks a lot!

sagnikbanerjee15 commented 2 years ago

Hello @saxovocal,

Thank you for the question. It has been on our minds to implement the option of including long-read sequencing information but has not been incorporated into the current version. Sorry!

If you are willing, I will be happy to collaborate and offer an ad hoc solution. Please let me know. I can be reached at sagnikbanerjee15@gmail.com

Thank you.