Adapt code to newer networkx version

sahg / PyTOPKAPI

The official PyTOPKAPI repository

http://sahg.github.io/PyTOPKAPI

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Open steve725 opened 2 years ago

steve725 commented 2 years ago

Hi, I'm using networkx 2.6.1 and got two errors in pytopkapi/pretreatment.py. To fix the errors I had to change:

change line 194: from ar_label_sort = np.array(nx.topological_sort(network_dag)) to ar_label_sort = np.array(list(nx.topological_sort(network_dag)))
change line 201: from dag_copy = nx.copy.deepcopy(network_dag) to dag_copy = network_dag.copy()

JustinPringle commented 2 years ago

heavens above! thank you!!